v0.2.0
Usage
Getting Started!
Example
Installation
Export to static image
Working in notebook
About
API Reference
Implementation
Development Guide
Q&A
SpatialTis
Docs
»
Index
Edit on GitHub
Index
A
|
C
|
D
|
E
|
F
|
G
|
H
|
N
|
O
|
P
|
R
|
S
|
T
|
V
A
adata_uns2df() (in module spatialtis.utils)
anndata (spatialtis.read_ROIs attribute)
C
cell_co_occurrence() (in module spatialtis)
(in module spatialtis.plotting)
cell_communities() (in module spatialtis.plotting)
cell_components() (in module spatialtis)
(in module spatialtis.plotting)
cell_density() (in module spatialtis)
(in module spatialtis.plotting)
cell_map() (in module spatialtis.plotting)
cell_morphology() (in module spatialtis)
(in module spatialtis.plotting)
cell_neighbors() (in module spatialtis.plotting)
col2adata_obs() (in module spatialtis.utils)
communities() (in module spatialtis)
D
df2adata_uns() (in module spatialtis.utils)
DotMatrix (class in spatialtis.plotting)
dotplot() (in module spatialtis.plotting)
E
exp_neighcells() (in module spatialtis)
(in module spatialtis.plotting)
exp_neighexp() (in module spatialtis)
export_neighbors() (spatialtis.Neighbors method)
expression_map() (in module spatialtis.plotting)
F
find_neighbors() (spatialtis.Neighbors method)
G
get_colors() (in module spatialtis.plotting)
get_linear_colors() (in module spatialtis.plotting)
graph_plot() (in module spatialtis.plotting)
graph_plot_interactive() (in module spatialtis.plotting)
H
heatmap() (in module spatialtis.plotting)
hotspot() (in module spatialtis)
N
neighborhood_analysis() (in module spatialtis)
(in module spatialtis.plotting)
Neighbors (class in spatialtis)
neighbors_count() (spatialtis.Neighbors method)
O
obs (spatialtis.read_ROIs attribute)
P
prepare_svca() (in module spatialtis.utils)
R
read_neighbors() (spatialtis.Neighbors method)
read_ROIs (class in spatialtis)
S
sankey() (in module spatialtis.plotting)
spatial_distribution() (in module spatialtis)
(in module spatialtis.plotting)
spatial_enrichment_analysis() (in module spatialtis)
(in module spatialtis.plotting)
spatial_heterogeneity() (in module spatialtis)
(in module spatialtis.plotting)
stacked_bar() (in module spatialtis.plotting)
T
to_anndata() (spatialtis.read_ROIs method)
tri_dotplot() (in module spatialtis.plotting)
TriDotMatrix (class in spatialtis.plotting)
V
var (spatialtis.read_ROIs attribute)
violin_plot() (in module spatialtis.plotting)
Read the Docs
v: v0.2.0
Versions
latest
stable
v0.2.0
Downloads
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.