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Index

A

AnalysisBase (class in spatialtis.abc) anndata (spatialtis.read_ROIs attribute)

ax (spatialtis.plotting.abc.MatplotlibMixin attribute) axes (spatialtis.plotting.abc.MatplotlibMixin attribute)

B

BokehMixin (class in spatialtis.plotting.abc)

C

cell_co_occurrence (class in spatialtis) cell_community (class in spatialtis)

cell_components (class in spatialtis) cell_density (class in spatialtis) cell_morphology (class in spatialtis)

F

fig (spatialtis.plotting.abc.MatplotlibMixin attribute)

find_neighbors (class in spatialtis)

G

get_result() (in module spatialtis)

H

hotspot (class in spatialtis)

M

MatplotlibMixin (class in spatialtis.plotting.abc)

method (spatialtis.abc.AnalysisBase attribute)

N

NCDMarkers (class in spatialtis)

neighborhood_analysis (class in spatialtis) NMDMarkers (class in spatialtis)

O

obs (spatialtis.read_ROIs attribute)

P

prepare_svca (class in spatialtis.ext)

PyechartsMixin (class in spatialtis.plotting.abc)

R

read_ROIs (class in spatialtis)

render() (spatialtis.plotting.abc.PyechartsMixin method) result (spatialtis.abc.AnalysisBase attribute)

S

save() (spatialtis.plotting.abc.BokehMixin method) (spatialtis.plotting.abc.MatplotlibMixin method) (spatialtis.plotting.abc.PyechartsMixin method)

spatial_co_expression (class in spatialtis) spatial_distribution (class in spatialtis) spatial_enrichment_analysis (class in spatialtis) spatial_heterogeneity (class in spatialtis)

T

to_anndata() (spatialtis.read_ROIs method)

V

var (spatialtis.read_ROIs attribute)