spatialtis.wkt_shapes#
- spatialtis.wkt_shapes(data, shape_key, export_key='cell_shape', write_config=True)[source]#
Transform normal coordination in AnnData.obs to wkt-format.
>>> import spatialtis as st >>> st.wkt_points(data, 'shape', export_key="shape_wkt")
- Parameters
- dataAnnData
The AnnData to work on.
- shape_keystr
The key that store shape information.
- export_keystr
The key to export.
- write_configbool, default: True
Whether to update shape key to global configuration.